Biochemical
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CellDesigner v.4.1.0.6
CellDesigner is a structured diagram editor for drawing gene-regulatory and biochemical networks.
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StochSim v.1 4
STOCHSIM is a stochastic simulator for biochemical reactions software tool. The particles are represented as individual software objects which react according to probabilities derived from concentrations and rate constants.
Genetic Code v.1.0
Study the genetic code with this tool. Genetic Code can display the universal genetic code, the one- and three-letter amino acid codes, the biochemical structures of the amino acids,
STOChastic Kinetic Simulator v.2.0
STOChastic Kinetic Simulation of biochemical processes with Gillespie algorithm. Biochemical processes simulations made easy. STOChastic Kinetic Simulator (STOCKS) help you perform stochastic simulations of biochemical processes.
StochPy for Mac OS X 1.0.9 Beta v.1.0
StochPy (Stochastic modelling in Python) is an easy-to-use package, which provides several stochastic simulation algorithms (SSAs), which can be used to simulate biochemical systems in a stochastic manner.
StochPy for Linux 1.0.9 Beta v.1.0
StochPy (Stochastic modelling in Python) is an easy-to-use package, which provides several stochastic simulation algorithms (SSAs), which can be used to simulate biochemical systems in a stochastic manner.
StochPy 1.0.9 Beta v.1.0
StochPy (Stochastic modelling in Python) is an easy-to-use package, which provides several stochastic simulation algorithms (SSAs), which can be used to simulate biochemical systems in a stochastic manner.
Cylindrical BLAST Viewer v.1.4
Presenting a way to visualize Biochemical alignments such as those seen between alignment search queries and their subjects, using a three dimensional arrangement of shapes.
JigCell for Mac OS X v.7.1.0
JigCell is an effort to develop and maintain an open source modeling environment for computational biology.
JigCell for Windows v.7.1.0
JigCell is an effort to develop and maintain an open source modeling environment for computational biology.
Allosteric Network Compiler v.1
A rule-based modelling framework for allosteric proteins and biochemical networks.